[KIDS] visual grading and manual mask production
Mario Radovich
mario.radovich at oapd.inaf.it
Wed Apr 10 18:28:22 CEST 2013
Dear Hugo
Automatic masks are available as FITS, but not manual masks at the
moment (only the combined automatic+manual). I think that it should
not be difficult modify Joey's scripts to do that: I can try to ask him,
or give a look myself (not before next week, I am afraid...). Is that
urgent ?
Cheers
Mario
On 04/10/2013 06:22 PM, Hugo Buddelmeijer wrote:
> Hi Mario,
>
> Okay, it wasn't clear to me that the *.msk.v1.0.all.* are the combined
> masks.
>
> Then my question becomes: are the automatic and manual masks (as FITS)
> available as well? [I suppose these could be reconstructed from the
> combined masks..]
>
> Within Astro-WISE everything has full data lineage. That is, we ingest
> the combined masks with references to the automatic and manual masks
> from which it is created. Therefore, it is (formally) not possible to
> ingest the combined masks without its dependencies. I can work around
> this, but prefer not to, because that way it is not clear how the
> masks are created, defeating purpose of the data lineage.
>
> E.g. these files, but for the latest run of KIDSCAT:
> http://vstportal.oacn.inaf.it/KIDSCAT/ESO_DR1/Masks/
>
> Hugo
>
> On 04/10/2013 06:07 PM, Mario Radovich wrote:
>> Dear Hugo
>>
>> the *.msk.v1.0.all.* are the automatic masks including the manual masks,
>> when available.
>>
>> Cheers
>>
>> Mario
>>
>>
>>
>> On 04/10/2013 05:52 PM, Hugo Buddelmeijer wrote:
>>> Thanks Francesco! Great work
>>>
>>> The files are being downloaded as we speak and I will start ingesting
>>> them tomorrow.
>>>
>>> Are all the masks available as well? I can only find the
>>> *.msk.v1.0.all.* ones. As per the naming convention these are only the
>>> automatic masks, are there also manual masks and combined masks for
>>> the ones where manual regions files have been created?
>>>
>>> [Perhaps I misunderstood things. I was under the impression that we
>>> would create catalogs using the manual masks when available.]
>>>
>>>
>>> A telecon tomorrow (see the rest of the mails) would be fine with me
>>> if necessary. Preferably after 13:30.
>>>
>>> My most relevant contribution would be that I would prefer it if any
>>> new files will be in new directories. That is, that it is certain that
>>> a file at a specific url has to be downloaded only once because it
>>> will never change. That makes bookkeeping for me much easier.
>>>
>>> Hugo
>>>
>>>
>>> On 04/10/2013 02:53 PM, Francesco La Barbera wrote:
>>>> Dear All,
>>>>
>>>> I'm happy to inform you that the new sourcelists have been produced
>>>> now.
>>>>
>>>> Hugo, you can access them for AW ingestion at the same link as last
>>>> time, i.e.
>>>>
>>>> http://vstportal.oacn.inaf.it/KIDSCAT/ESO_DR1_kc1.6/
>>>>
>>>> I checked that all files are in place, and there was no evident issue
>>>> with all different data products.
>>>> The sourcelists have been generated with the new, latest, masks passed
>>>> me by Mario and Nicola,
>>>> and using KIDS-CAT v.1.6 (that includes sat mag and ellipticity
>>>> estimates).
>>>>
>>>> Pls, lemme know if everything is OK with this.
>>>>
>>>> Cheers,
>>>> Francesco
>>>>
>>>>
>>>>
>>>>
>>>> On Tue, Apr 9, 2013 at 2:58 PM, Gijs Verdoes Kleijn
>>>> <verdoes at astro.rug.nl <mailto:verdoes at astro.rug.nl>> wrote:
>>>>
>>>> Dear Nicola and Mario and Hugo,
>>>>
>>>> How is the automated mask + sourcelist production going?
>>>>
>>>> I am now coordinating the visual grading and manual mask
>>>> production.
>>>> My plan is to have that team start to work on all coadds at
>>>> is_valid=1 and 2 asap.
>>>> (NB: all coadds that will be re-processed this week are now set to
>>>> is_valid=0)
>>>>
>>>> As far as I see this effort is decoupled (enough) from your
>>>> mask+sourcelist effort and there can start now. I will tell the
>>>> manual mask team to anticipate improvement on the current
>>>> automated
>>>> masks. And hence start no manually improving those.
>>>>
>>>> Please let me know if you see problems with this decoupled
>>>> parallel
>>>> effort.
>>>>
>>>> Best wishes, Gijs
>>>>
>>>>
>>>>
>>>> On 04/08/2013 11:04 PM, Nicola R. Napolitano wrote:
>>>>>
>>>>> OK Lino. Thanks
>>>>>
>>>>> N
>>>>>
>>>>>
>>>>>
>>>>> On 4/8/13 8:41 PM, aniello grado wrote:
>>>>>> Hi Nicola,
>>>>>>
>>>>>> the manual masks are on beo3 in the dir:
>>>>>>
>>>>>> /opt/AW/current/astro/experimental/kids/regionfiles
>>>>>>
>>>>>> Lino
>>>>>>
>>>>>>
>>>>>> On Mon, Apr 8, 2013 at 3:37 PM, Nicola R. Napolitano
>>>>>> <napolita at na.astro.it <mailto:napolita at na.astro.it>> wrote:
>>>>>>
>>>>>>
>>>>>> Hi Lino,
>>>>>>
>>>>>> automatic masking is about to start. Mario and I are still
>>>>>> struggling with the g-band but we should be able to work
>>>>>> this
>>>>>> out by the end of the day.
>>>>>> Meanwhile r,i,u are ready to go after we have checked the
>>>>>> spike length, which needs just some more very short visual
>>>>>> test.
>>>>>> This means that auto-masks will be possibly ready tomorrow
>>>>>> morning.
>>>>>>
>>>>>> To start the sourcelists extraction, though, we need to
>>>>>> incorporate the manual masks into the auto masks, since the
>>>>>> idea is to provide a unique flag in the catalogs.
>>>>>> Thus we need to know whether the final manual masks are also
>>>>>> ready for the download. If so please give to Mario the
>>>>>> necessary references for that.
>>>>>>
>>>>>> Cheers,
>>>>>>
>>>>>> Nicola
>>>>>>
>>>>>> On 4/6/13 3:55 PM, aniello grado wrote:
>>>>>>> Hi Mario and Nicola,
>>>>>>>
>>>>>>> the coadds are ready for automatic masking.
>>>>>>>
>>>>>>> Lino
>>>>>>>
>>>>>>> ---------- Forwarded message ----------
>>>>>>> From: <jelte at strw.leidenuniv.nl
>>>>>>> <mailto:jelte at strw.leidenuniv.nl>>
>>>>>>> Date: Sat, Apr 6, 2013 at 2:24 PM
>>>>>>> Subject: Re: reprocessing and is_valid = 1 coadds
>>>>>>> To: Gijs Verdoes Kleijn <verdoes at astro.rug.nl
>>>>>>> <mailto:verdoes at astro.rug.nl>>, Lino Grado
>>>>>>> <agrado at na.astro.it <mailto:agrado at na.astro.it>>
>>>>>>>
>>>>>>>
>>>>>>> Hi Gijs and Lino,
>>>>>>>
>>>>>>> just to let you know that reprocessing is done now.
>>>>>>> We now have again 200 DR1 coadds:
>>>>>>>
>>>>>>> awe> query = Comment.content == 'KiDS-ESO-DR1-Coadd'
>>>>>>> awe> list =
>>>>>>> [CoaddedRegriddedFrame(object_id=c.db_object_id)
>>>>>>> for c in query]
>>>>>>> awe> len(list)
>>>>>>> 200
>>>>>>>
>>>>>>> The total number of reprocessed coadds is 50:
>>>>>>> awe> query = Comment.content ==
>>>>>>> 'KiDS-ESO-DR1-Coadd-Reprocessed-After-QA1'
>>>>>>> awe> list =
>>>>>>> [CoaddedRegriddedFrame(object_id=c.db_object_id)
>>>>>>> for c in query]
>>>>>>> awe> len(list)
>>>>>>> 50
>>>>>>>
>>>>>>> Querying for the comment 'KiDS-ESO-DR1-Coadd-DISCARDED'
>>>>>>> will
>>>>>>> also give 50
>>>>>>> coadds, namely the ones replaced by the reprocessed coadds.
>>>>>>>
>>>>>>> From the 74 is_valid=0 coadds, 24 were not reprocessed
>>>>>>> since
>>>>>>> according to
>>>>>>> the reprocessing teams there was no improvement possible.
>>>>>>> These coadds
>>>>>>> that are retained in DR1 can be recognized by the comment
>>>>>>> 'KiDS-ESO-DR1-Coadd-Retained-After-QA1':
>>>>>>>
>>>>>>> awe> query = Comment.content ==
>>>>>>> 'KiDS-ESO-DR1-Coadd-Retained-After-QA1'
>>>>>>> awe> list =
>>>>>>> [CoaddedRegriddedFrame(object_id=c.db_object_id)
>>>>>>> for c in query]
>>>>>>> awe> len(list)
>>>>>>> 24
>>>>>>>
>>>>>>> Cheers,
>>>>>>> Jelte
>>>>>>>
>>>>>>> > Hi Gijs and Lino,
>>>>>>> >
>>>>>>> > reprocessing is almost done.
>>>>>>> > There were still 3 coadds that needed to be reprocessed
>>>>>>> and that is
>>>>>>> > currently being done.
>>>>>>> > Over the weekend I will update their comments etc, and
>>>>>>> notify Mario so
>>>>>>> > he can download the new ones for source extraction.
>>>>>>> >
>>>>>>> > I have also put a table on the wiki with the coadds that
>>>>>>> were set to
>>>>>>> > is_valid = 1 during the visual inspection (QA1):
>>>>>>> >
>>>>>>> http://wiki.astro-wise.org/projects:kids:data_deliveries:kids-eso-dr1:productiondashboard#coadd_set_to_is_valid_1_during_qa1
>>>>>>>
>>>>>>>
>>>>>>> > Also included in the table (where it was clear to me) is
>>>>>>> the reasons why
>>>>>>> > the visual inspection team thinks these coadds could be
>>>>>>> improved if
>>>>>>> > there is enough time.
>>>>>>> > We should set up a dedicated team that can have a look at
>>>>>>> these coadds
>>>>>>> > next week to see which ones can be improved by
>>>>>>> reprocessing.
>>>>>>> > In any case our goal should be to have all final
>>>>>>> coadds by
>>>>>>> next Friday
>>>>>>> > (April 12).
>>>>>>> >
>>>>>>> > Cheers,
>>>>>>> > Jelte
>>>>>>> >
>>>>>>> > --
>>>>>>> > Dr. Jelte T. A. de Jong
>>>>>>> > KiDS project manager
>>>>>>> > Sterrewacht Leiden
>>>>>>> > Leiden University, Leiden, the Netherlands
>>>>>>> > E: jelte at strw.leidenuniv.nl
>>>>>>> <mailto:jelte at strw.leidenuniv.nl>
>>>>>>> > T: +31-(0)715275818 <tel:%2B31-%280%29715275818>
>>>>>>> > W: jelte.jdejong.net <http://jelte.jdejong.net>
>>>>>>> >
>>>>>>> >
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> --
>>>>>>> <<<<<<<<<<<<<<<<<<<<>>>>>>>>>>>>>>>>>>>>>
>>>>>>>
>>>>>>> Aniello Grado, PhD
>>>>>>>
>>>>>>> Ricercatore Astronomo
>>>>>>> INAF- Osservatorio Astronomico di Capodimonte
>>>>>>> Via Moiariello 16 80131 Napoli
>>>>>>> ITALIA
>>>>>>> Tel: 0039 0815575547 <tel:0039%200815575547>
>>>>>>> Fax: 0039 0815575433 <tel:0039%200815575433>
>>>>>>>
>>>>>>> <<<<<<<<<<<<<<<<<<<<>>>>>>>>>>>>>>>>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> Nicola R. Napolitano
>>>>>> Research Astronomer
>>>>>> INAF - Observatory of Capodimonte
>>>>>> Salita Moiariello, 16, 80131, Napoli (Italy)
>>>>>> phone:+39 081 5575509 <tel:%2B39%20081%205575509>; fax:+39
>>>>>> 081 456710 <tel:%2B39%20081%20456710>
>>>>>> email:napolita at na.astro.it <mailto:napolita at na.astro.it>
>>>>>> web page:http://www.na.astro.it/~napolita
>>>>>> <http://www.na.astro.it/%7Enapolita>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> <<<<<<<<<<<<<<<<<<<<>>>>>>>>>>>>>>>>>>>>>
>>>>>>
>>>>>> Aniello Grado, PhD
>>>>>>
>>>>>> Ricercatore Astronomo
>>>>>> INAF- Osservatorio Astronomico di Capodimonte
>>>>>> Via Moiariello 16 80131 Napoli
>>>>>> ITALIA
>>>>>> Tel: 0039 0815575547 <tel:0039%200815575547>
>>>>>> Fax: 0039 0815575433 <tel:0039%200815575433>
>>>>>>
>>>>>> <<<<<<<<<<<<<<<<<<<<>>>>>>>>>>>>>>>>>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Nicola R. Napolitano
>>>>> Research Astronomer
>>>>> INAF - Observatory of Capodimonte
>>>>> Salita Moiariello, 16, 80131, Napoli (Italy)
>>>>> phone:+39 081 5575509 <tel:%2B39%20081%205575509>; fax:+39 081
>>>>> 456710 <tel:%2B39%20081%20456710>
>>>>> email:napolita at na.astro.it <mailto:napolita at na.astro.it>
>>>>> web page:http://www.na.astro.it/~napolita
>>>>> <http://www.na.astro.it/%7Enapolita>
>>>>
>>>> --
>>>> --------------------------------------------------------------------
>>>> |dr Gijs Verdoes Kleijn | astronomer |
>>>> |e-mail:verdoes at astro.rug.nl <mailto:verdoes at astro.rug.nl> |
>>>> OmegaCEN / Kapteyn Institute / |
>>>> |www:www.astro.rug.nl/~verdoes
>>>> <http://www.astro.rug.nl/~verdoes> | Target |
>>>> |tel:+31-50-3638326 <tel:%2B31-50-3638326> |
>>>> University of Groningen |
>>>> |mobile:+31-654658050 <tel:%2B31-654658050> | postal
>>>> address: |
>>>> | | Kapteyn Astronomical
>>>> Institute |
>>>> | | Postbus 800, 9700 AV,
>>>> Groningen|
>>>> | | The
>>>> Netherlands |
>>>> --------------------------------------------------------------------
>>>>
>>>>
>>>
>
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